Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13838 and 13839 are separated by 516 nucleotides13839 and 13840 are separated by 381 nucleotides13840 and 13841 are separated by 137 nucleotides13841 and 13842 are separated by 278 nucleotides mRNA_5470: 13838 - K00599 METTL6 methyltransferase-like protein 6, at 168,838 to 170,246 13838 mRNA_5471: 13839 - KOG4696 Uncharacterized conserved protein, at 170,763 to 172,785 13839 mRNA_5472: 13840 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 173,167 to 176,789 13840 mRNA_5473: 13841 - KOG2226 Proteins containing regions of low-complexity, at 176,927 to 180,681 13841 mRNA_5474: 13842 - HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690, at 180,960 to 181,593 13842
Group Condition mRNA_5470 mRNA_5471 mRNA_5472 mRNA_5473 mRNA_5474
13838 13839 13840 13841 13842
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.0 N.D. -1.0 N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.0 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1 N.D. +0.1 N.D.
auxotrophy Dropout Complete -0.4 -0.3 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.5 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 N.D. -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.0 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.3 N.D. +0.0 N.D.
auxotrophy YNB Glucose -0.0 -0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Glucose +0.4 -0.1 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 N.D. +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.1 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.2 N.D. +0.2 N.D.
growth on ypd YPD +0.3 +0.2 N.D. +0.4 N.D.
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