Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13841 and 13842 are separated by 278 nucleotides13842 and 13843 are separated by 158 nucleotides13843 and 13844 are separated by 438 nucleotides13844 and 13845 are separated by 269 nucleotides mRNA_5473: 13841 - KOG2226 Proteins containing regions of low-complexity, at 176,927 to 180,681 13841 mRNA_5474: 13842 - HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690, at 180,960 to 181,593 13842 mRNA_5475: 13843 - KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins, at 181,752 to 183,361 13843 mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183,800 to 188,314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188,584 to 192,714 13845
Group Condition mRNA_5473 mRNA_5474 mRNA_5475 mRNA_5476 mRNA_5477
13841 13842 13843 13844 13845
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -0.4 -1.3 -0.9
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.3 -0.3 -2.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.3 -0.7 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 N.D. +0.5 +0.0 -1.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. -0.7 +0.3 -0.9
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.1 -1.0 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. -0.3 +0.3 -1.0
auxotrophy YNB Glucose +0.2 N.D. -0.2 -0.2 -1.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.0 -1.7 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.2 -0.2 -1.1
auxotrophy Dropout Complete +0.2 N.D. -0.4 +0.0 -1.1
growth on ypd YPD +0.4 N.D. -0.1 -0.7 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.3 +0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.4 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.1 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.4 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.5 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. -0.2 -0.0 +0.8
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.3 +1.3 +0.1
growth on oleic acid YNB Glucose -0.1 N.D. -0.0 +1.2 -0.1
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