Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13843 and 13844 are separated by 438 nucleotides13844 and 13845 are separated by 269 nucleotides13845 and 13846 are separated by 151 nucleotides13846 and 13847 are separated by 396 nucleotides mRNA_5475: 13843 - KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins, at 181,752 to 183,361 13843 mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183,800 to 188,314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188,584 to 192,714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192,866 to 194,409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194,806 to 195,878 13847
Group Condition mRNA_5475 mRNA_5476 mRNA_5477 mRNA_5478 mRNA_5479
13843 13844 13845 13846 13847
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 -2.3 -0.9 -0.4
auxotrophy Dropout Complete -0.4 +0.0 -1.1 -0.7 -1.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.3 -0.9 -0.2 -0.5
auxotrophy YNB Glucose -0.2 -0.2 -1.3 -0.7 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -1.1 -0.6 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.7 -1.3 +0.5 -0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -1.0 -0.9 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.3 -1.0 -0.4 -0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -1.7 +0.3 -0.9 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.1 -0.4 -0.7 -0.7
growth on ypd YPD -0.1 -0.7 -0.8 +0.2 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.3 -0.9 -0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.4 +0.2 -0.3 +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.2 +0.4 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.2 -0.4 +0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.0 -1.3 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.0 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 +0.8 -0.3 -0.4
growth on oleic acid YNB Glucose -0.0 +1.2 -0.1 +0.5 -0.1
growth on oleic acid YNB Oleic Acid -0.3 +1.3 +0.1 +0.2 +0.2
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