Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13844 and 13845 are separated by 269 nucleotides13845 and 13846 are separated by 151 nucleotides13846 and 13847 are separated by 396 nucleotides13847 and 13848 are separated by 2499 nucleotides mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183,800 to 188,314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188,584 to 192,714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192,866 to 194,409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194,806 to 195,878 13847 mRNA_5480: 13848 - Hypothetical Protein, at 198,378 to 198,864 13848
Group Condition mRNA_5476 mRNA_5477 mRNA_5478 mRNA_5479 mRNA_5480
13844 13845 13846 13847 13848
auxotrophy YNB Glucose 75mM Methionine -0.3 -2.3 -0.9 -0.4 +0.1
auxotrophy Dropout Complete +0.0 -1.1 -0.7 -1.4 -0.2
auxotrophy YNB Glucose -0.2 -1.3 -0.7 -0.8 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.9 -0.2 -0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -1.1 -0.6 -1.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.9 -0.1 -0.6 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.7 +0.3 -0.9 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -1.3 +0.5 -0.8 +0.0
growth on ypd YPD -0.7 -0.8 +0.2 -0.7 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -1.0 -0.4 -0.8 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 -0.7 -0.7 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -1.3 +0.3 -0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.9 -0.2 -0.4 +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.4 -0.5 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.4 +0.0 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.3 +0.1 -0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 +0.2 -0.3 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 +0.1 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.8 -0.3 -0.4 +0.3
growth on oleic acid YNB Oleic Acid +1.3 +0.1 +0.2 +0.2 -0.3
growth on oleic acid YNB Glucose +1.2 -0.1 +0.5 -0.1 +0.1
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