Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13845 and 13846 are separated by 151 nucleotides13846 and 13847 are separated by 396 nucleotides13847 and 13848 are separated by 2499 nucleotides13848 and 13849 are separated by 467 nucleotides mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188,584 to 192,714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192,866 to 194,409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194,806 to 195,878 13847 mRNA_5480: 13848 - Hypothetical Protein, at 198,378 to 198,864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199,332 to 200,672 13849
Group Condition mRNA_5477 mRNA_5478 mRNA_5479 mRNA_5480 mRNA_5481
13845 13846 13847 13848 13849
auxotrophy YNB Glucose 75mM Methionine -2.3 -0.9 -0.4 +0.1 +0.3
auxotrophy Dropout Complete -1.1 -0.7 -1.4 -0.2 +0.2
auxotrophy YNB Glucose -1.3 -0.7 -0.8 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -1.1 -0.6 -1.0 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.4 -0.8 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.7 -0.7 +0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 +0.3 -0.1 +0.4 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.1 -0.6 +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.2 -0.5 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 +0.5 -0.8 +0.0 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.5 -0.3 -0.3 -0.2
growth on ypd YPD -0.8 +0.2 -0.7 +0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.2 -0.4 +0.6 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.0 -0.1 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.9 +0.1 -0.1 +0.5
growth on ricinoleic acid YNB Glucose -0.3 +0.1 -0.4 +0.3 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 -0.3 +0.3 -0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.2 +0.2 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 -0.3 -0.4 +0.3 -0.1
growth on oleic acid YNB Glucose -0.1 +0.5 -0.1 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.3 +0.3 +0.3
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