Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13846 and 13847 are separated by 396 nucleotides13847 and 13848 are separated by 2499 nucleotides13848 and 13849 are separated by 467 nucleotides13849 and 13850 are separated by 372 nucleotides mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192,866 to 194,409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194,806 to 195,878 13847 mRNA_5480: 13848 - Hypothetical Protein, at 198,378 to 198,864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199,332 to 200,672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201,045 to 202,061 13850
Group Condition mRNA_5478 mRNA_5479 mRNA_5480 mRNA_5481 mRNA_5482
13846 13847 13848 13849 13850
auxotrophy Dropout Complete -0.7 -1.4 -0.2 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 -1.0 +0.2 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.3 -0.3 -0.2 -0.1
auxotrophy YNB Glucose -0.7 -0.8 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.7 +0.4 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.8 +0.5 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.9 -0.4 +0.1 +0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.5 +0.1 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.4 +0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.9 +0.1 -0.1 +0.5 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6 +0.2 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 +0.4 -0.7 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.8 +0.0 +0.4 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 +0.3 -0.0 +0.0
growth on ypd YPD +0.2 -0.7 +0.2 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 +0.2 -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 +0.6 +0.5 -0.2
growth on oleic acid YNB Oleic Acid +0.2 +0.2 -0.3 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.4 +0.3 +0.4 +0.1
growth on oleic acid YNB Glucose +0.5 -0.1 +0.1 +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 +0.3 +0.3 +0.1
remove
mRNA_5478
plot
remove
mRNA_5479
plot
remove
mRNA_5480
remove
mRNA_5481
plot
remove
mRNA_5482
plot