Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13851 and 13852 are separated by 387 nucleotides13852 and 13853 are separated by 684 nucleotides13853 and 13854 are separated by 388 nucleotides13854 and 13855 are separated by 537 nucleotides mRNA_5483: 13851 - KOG1339 Aspartyl protease, at 202,681 to 205,111 13851 mRNA_5484: 13852 - K16612 HOOK1 protein HOOK1, at 205,499 to 209,113 13852 mRNA_5485: 13853 - K02896 RP-L24e, RPL24 large subunit ribosomal protein L24e, at 209,798 to 210,668 13853 mRNA_5486: 13854 - K15695 RNF103, KF1 E3 ubiquitin-protein ligase RNF103, at 211,057 to 213,286 13854 mRNA_5487: 13855 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 213,824 to 214,622 13855
Group Condition mRNA_5483 mRNA_5484 mRNA_5485 mRNA_5486 mRNA_5487
13851 13852 13853 13854 13855
growth on ricinoleic acid YNB Ricinoleic Acid -3.7 -0.3 N.D. +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.8 -0.2 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Glucose -1.8 +0.0 N.D. +0.0 -0.0
growth on oleic acid YNB Glucose -1.3 +0.1 N.D. -0.0 -0.5
auxotrophy YNB Glucose -1.3 -0.1 N.D. -0.3 +0.1
auxotrophy Dropout Complete -1.4 -0.2 N.D. -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -1.4 -0.0 N.D. -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.1 N.D. -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 +0.1 N.D. +0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.3 +0.2 N.D. -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine -1.3 +0.1 N.D. -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.7 +0.1 N.D. -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 N.D. -0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 N.D. -0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.0 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 N.D. +0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 N.D. -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 N.D. +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 N.D. +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.1 N.D. -0.2 +0.2
growth on ypd YPD +0.3 -0.3 N.D. +0.2 +0.6
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