Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13852 and 13853 are separated by 684 nucleotides13853 and 13854 are separated by 388 nucleotides13854 and 13855 are separated by 537 nucleotides13855 and 13856 are separated by 261 nucleotides mRNA_5484: 13852 - K16612 HOOK1 protein HOOK1, at 205,499 to 209,113 13852 mRNA_5485: 13853 - K02896 RP-L24e, RPL24 large subunit ribosomal protein L24e, at 209,798 to 210,668 13853 mRNA_5486: 13854 - K15695 RNF103, KF1 E3 ubiquitin-protein ligase RNF103, at 211,057 to 213,286 13854 mRNA_5487: 13855 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 213,824 to 214,622 13855 mRNA_5488: 13856 - K01078 E3.1.3.2 acid phosphatase, at 214,884 to 216,932 13856
Group Condition mRNA_5484 mRNA_5485 mRNA_5486 mRNA_5487 mRNA_5488
13852 13853 13854 13855 13856
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.4 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.4 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -0.1 -0.4 -0.5
auxotrophy Dropout Complete -0.2 N.D. -0.2 -0.0 -0.1
auxotrophy YNB Glucose -0.1 N.D. -0.3 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +0.1 -0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. +0.2 -0.1 -0.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.1 -0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.3 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.2 +0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. +0.2 -0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.4 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.0 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.1 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.1 +0.1 +0.1
growth on oleic acid YNB Glucose +0.1 N.D. -0.0 -0.5 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.0 -0.2 +0.1
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.0 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 +0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.3 +0.0 +0.3
growth on ypd YPD -0.3 N.D. +0.2 +0.6 +0.5
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