Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13856 and 13857 are separated by 454 nucleotides13857 and 13858 are separated by 119 nucleotides13858 and 13859 are separated by 353 nucleotides13859 and 13860 are separated by 1130 nucleotides mRNA_5488: 13856 - K01078 E3.1.3.2 acid phosphatase, at 214,884 to 216,932 13856 mRNA_5489: 13857 - KOG1263 Multicopper oxidases, at 217,387 to 219,494 13857 mRNA_5490: 13858 - Hypothetical Protein, at 219,614 to 220,900 13858 mRNA_5491: 13859 - Hypothetical Protein, at 221,254 to 222,129 13859 mRNA_5492: 13860 - K15436 TRPO3, MTR10 transportin-3, at 223,260 to 226,500 13860
Group Condition mRNA_5488 mRNA_5489 mRNA_5490 mRNA_5491 mRNA_5492
13856 13857 13858 13859 13860
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 +0.7 -1.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 +0.1 -0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.0 -0.5 +0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.4 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.2 -0.7 +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 +0.4 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 +0.4 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.4 -0.4 +0.8 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.1 +0.2 N.D.
auxotrophy Dropout Complete -0.1 +0.0 -0.0 +0.5 N.D.
growth on ypd YPD +0.5 -0.1 -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 -0.3 +0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.6 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.1 -0.0 +0.6 N.D.
auxotrophy YNB Glucose +0.1 +0.2 +0.2 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.0 +0.4 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 +0.4 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.1 +0.7 N.D.
growth on oleic acid YNB Glucose +0.5 -0.0 -0.1 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 -0.0 +0.7 N.D.
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