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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13856 and 13857 are separated by 454 nucleotides
13857 and 13858 are separated by 119 nucleotides
13858 and 13859 are separated by 353 nucleotides
13859 and 13860 are separated by 1130 nucleotides
mRNA_5488: 13856 - K01078 E3.1.3.2 acid phosphatase, at 214,884 to 216,932
13856
mRNA_5489: 13857 - KOG1263 Multicopper oxidases, at 217,387 to 219,494
13857
mRNA_5490: 13858 - Hypothetical Protein, at 219,614 to 220,900
13858
mRNA_5491: 13859 - Hypothetical Protein, at 221,254 to 222,129
13859
mRNA_5492: 13860 - K15436 TRPO3, MTR10 transportin-3, at 223,260 to 226,500
13860
Group
Condition
mRNA
_5488
mRNA
_5489
mRNA
_5490
mRNA
_5491
mRNA
_5492
13856
13857
13858
13859
13860
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.3
+0.7
-1.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.1
+0.1
-0.6
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.0
-0.5
+0.5
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
+0.4
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.2
-0.7
+0.6
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.0
+0.4
-0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.0
+0.4
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.4
-0.4
+0.8
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
-0.1
+0.2
N.D.
auxotrophy
Dropout Complete
-0.1
+0.0
-0.0
+0.5
N.D.
growth on ypd
YPD
+0.5
-0.1
-0.1
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.0
+0.1
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
-0.3
+0.5
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.6
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
-0.0
+0.6
N.D.
auxotrophy
YNB Glucose
+0.1
+0.2
+0.2
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.0
+0.4
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.2
+0.4
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.1
+0.1
+0.7
N.D.
growth on oleic acid
YNB Glucose
+0.5
-0.0
-0.1
+0.7
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.5
-0.0
+0.7
N.D.
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