Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13857 and 13858 are separated by 119 nucleotides
13858 and 13859 are separated by 353 nucleotides
13859 and 13860 are separated by 1130 nucleotides
13860 and 13861 are separated by 429 nucleotides
mRNA_5489: 13857 - KOG1263 Multicopper oxidases, at 217,387 to 219,494
13857
mRNA_5490: 13858 - Hypothetical Protein, at 219,614 to 220,900
13858
mRNA_5491: 13859 - Hypothetical Protein, at 221,254 to 222,129
13859
mRNA_5492: 13860 - K15436 TRPO3, MTR10 transportin-3, at 223,260 to 226,500
13860
mRNA_5493: 13861 - KOG0297 TNF receptor-associated factor, at 226,930 to 227,786
13861
Group
Condition
mRNA
_5489
mRNA
_5490
mRNA
_5491
mRNA
_5492
mRNA
_5493
13857
13858
13859
13860
13861
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
-0.6
N.D.
-0.7
growth on ypd
YPD
-0.1
-0.1
+0.1
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.4
-0.2
N.D.
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.7
-1.3
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.4
-0.5
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.7
+0.6
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.5
+0.5
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
+0.2
-0.1
+0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.3
+0.5
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.4
+0.8
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.1
+0.2
N.D.
-0.0
auxotrophy
Dropout Complete
+0.0
-0.0
+0.5
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.4
-0.2
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
+0.6
N.D.
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.4
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose
+0.2
+0.2
+0.2
N.D.
+0.0
growth on oleic acid
YNB Glucose
-0.0
-0.1
+0.7
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.6
+0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.0
+0.7
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
+0.7
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.4
+0.1
N.D.
+0.1
remove
mRNA_5489
plot
remove
mRNA_5490
plot
remove
mRNA_5491
remove
mRNA_5492
plot
remove
mRNA_5493
plot