Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13862 and 13863 are separated by 270 nucleotides13863 and 13864 are separated by 455 nucleotides13864 and 13865 are separated by 2433 nucleotides13865 and 13866 are separated by 1518 nucleotides mRNA_5494: 13862 - KOG1119 Mitochondrial Fe-S cluster biosynthesis protein ISA2 (contains a HesB-like domain), at 228,031 to 229,041 13862 mRNA_5495: 13863 - K10733 GINS2, PSF2 GINS complex subunit 2, at 229,312 to 230,460 13863 mRNA_5496: 13864 - HMMPfam-HSF-type DNA-binding-PF00447,SUPERFAMILY--SSF46785, at 230,916 to 233,624 13864 mRNA_5497: 13865 - KOG3872 FOG FHA domain, at 236,058 to 237,247 13865 mRNA_5498: 13866 - Hypothetical Protein, at 238,766 to 240,187 13866
Group Condition mRNA_5494 mRNA_5495 mRNA_5496 mRNA_5497 mRNA_5498
13862 13863 13864 13865 13866
auxotrophy YNB Glucose N.D. N.D. -0.6 -0.5 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.1 -0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 -0.4 -0.1
auxotrophy Dropout Complete N.D. N.D. +0.3 -0.5 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.7 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.0 -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.5 -0.1
growth on ypd YPD N.D. N.D. -0.7 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.5 -0.5 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.3 +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.7 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.0 +0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.9 -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.8 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.6 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.4 +0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.0 +0.6 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +1.3 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +1.1 +0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +1.0 +0.3 +0.2
growth on oleic acid YNB Glucose N.D. N.D. +1.4 +0.1 -0.1
remove
mRNA_5494
plot
remove
mRNA_5495
plot
remove
mRNA_5496
remove
mRNA_5497
plot
remove
mRNA_5498
plot