Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13865 and 13866 are separated by 1518 nucleotides13866 and 13867 are separated by 379 nucleotides13867 and 13868 are separated by 382 nucleotides13868 and 13869 are separated by 271 nucleotides mRNA_5497: 13865 - KOG3872 FOG FHA domain, at 236,058 to 237,247 13865 mRNA_5498: 13866 - Hypothetical Protein, at 238,766 to 240,187 13866 mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240,567 to 242,106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242,489 to 245,110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245,382 to 247,759 13869
Group Condition mRNA_5497 mRNA_5498 mRNA_5499 mRNA_5500 mRNA_5501
13865 13866 13867 13868 13869
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.4 -0.6 -0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 -0.7 +0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.6 -0.2 -0.2 -0.0 -0.3
auxotrophy YNB Glucose -0.5 -0.2 -0.5 +0.1 -0.2
auxotrophy Dropout Complete -0.5 -0.3 -0.5 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 -0.6 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 -0.1 +0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.0 -0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.1 +0.1 +0.3 -0.1
growth on oleic acid YNB Glucose +0.1 -0.1 -0.5 +0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 +0.0 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.0 +0.2 +0.4 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.1 -0.2 +0.1
growth on ypd YPD +0.3 +0.1 -0.3 +0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.6 +0.2 +0.2 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.2 -0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 +0.6 -0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.1 -0.5 +0.2 +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 +0.5 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 +0.7 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.1 +0.8 +0.1 +0.5
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