Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13866 and 13867 are separated by 379 nucleotides13867 and 13868 are separated by 382 nucleotides13868 and 13869 are separated by 271 nucleotides13869 and 13870 are separated by 152 nucleotides mRNA_5498: 13866 - Hypothetical Protein, at 238,766 to 240,187 13866 mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240,567 to 242,106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242,489 to 245,110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245,382 to 247,759 13869 mRNA_5502: 13870 - Hypothetical Protein, at 247,912 to 250,557 13870
Group Condition mRNA_5498 mRNA_5499 mRNA_5500 mRNA_5501 mRNA_5502
13866 13867 13868 13869 13870
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.6 -0.1 -0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.7 +0.1 -0.3 +0.3
auxotrophy YNB Glucose -0.2 -0.5 +0.1 -0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 -0.0 -0.3 +0.1
auxotrophy Dropout Complete -0.3 -0.5 +0.2 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 +0.1 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 +0.2 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -0.2 -0.2 -0.0
growth on oleic acid YNB Glucose -0.1 -0.5 +0.2 +0.4 +0.0
growth on ypd YPD +0.1 -0.3 +0.1 +0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.3 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 +0.3 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.6 -0.2 +0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.0 -0.2 +0.1 -0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 -0.2 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 +0.4 +0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 +0.2 +1.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.7 -0.4 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.8 +0.1 +0.5 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 +0.2 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 +0.1 +0.4 +0.2
remove
mRNA_5498
plot
remove
mRNA_5499
plot
remove
mRNA_5500
remove
mRNA_5501
plot
remove
mRNA_5502
plot