Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13867 and 13868 are separated by 382 nucleotides13868 and 13869 are separated by 271 nucleotides13869 and 13870 are separated by 152 nucleotides13870 and 13871 are separated by 1005 nucleotides mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240,567 to 242,106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242,489 to 245,110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245,382 to 247,759 13869 mRNA_5502: 13870 - Hypothetical Protein, at 247,912 to 250,557 13870 mRNA_5503: 13871 - HMMPfam-Chitin synthase III catalytic subunit-PF12271, at 251,563 to 253,057 13871
Group Condition mRNA_5499 mRNA_5500 mRNA_5501 mRNA_5502 mRNA_5503
13867 13868 13869 13870 13871
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.1 -0.5 -0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 -0.1 -0.1 -1.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 +0.1 +0.2 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.2 +0.3 -0.3 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.1 -0.3 +0.3 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.3 +0.1 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.2 +1.0 -0.0 -0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 -0.2 -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 +0.1 -0.0 -0.8
growth on ypd YPD -0.3 +0.1 +0.3 -0.0 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.3 +0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 -0.1 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.4 +0.4 -0.1 -0.4
auxotrophy Dropout Complete -0.5 +0.2 -0.1 +0.0 +0.5
auxotrophy YNB Glucose -0.5 +0.1 -0.2 +0.1 +0.9
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 -0.2 -0.1 +0.7
growth on oleic acid YNB Glucose -0.5 +0.2 +0.4 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 +0.1 +0.5 -0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 +0.4 +0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.1 +0.5 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 +0.2 +0.4 +0.5
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