Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13869 and 13870 are separated by 152 nucleotides13870 and 13871 are separated by 1005 nucleotides13871 and 13872 are separated by 454 nucleotides13872 and 13873 are separated by 355 nucleotides mRNA_5501: 13869 - Hypothetical Protein, at 245,382 to 247,759 13869 mRNA_5502: 13870 - Hypothetical Protein, at 247,912 to 250,557 13870 mRNA_5503: 13871 - HMMPfam-Chitin synthase III catalytic subunit-PF12271, at 251,563 to 253,057 13871 mRNA_5504: 13872 - KOG4034 Uncharacterized conserved protein NOF (Neighbor of FAU), at 253,512 to 254,101 13872 mRNA_5505: 13873 - KOG0297 TNF receptor-associated factor, at 254,457 to 255,755 13873
Group Condition mRNA_5501 mRNA_5502 mRNA_5503 mRNA_5504 mRNA_5505
13869 13870 13871 13872 13873
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -1.0 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 -0.4 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.1 +0.4 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 -0.8 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.3 -0.6 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.8 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.5 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 -0.4 N.D. +0.0
growth on ypd YPD +0.3 -0.0 +0.1 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.4 +0.5 N.D. -0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 +0.7 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -0.0 -0.8 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.2 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.3 +0.5 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.1 +0.5 N.D. +0.0
auxotrophy Dropout Complete -0.1 +0.0 +0.5 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 +0.5 N.D. -0.0
auxotrophy YNB Glucose -0.2 +0.1 +0.9 N.D. -0.1
growth on oleic acid YNB Glucose +0.4 +0.0 +0.5 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.5 +0.7 N.D. -0.1
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