Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13873 and 13874 are separated by 1562 nucleotides13874 and 13875 are separated by 98 nucleotides13875 and 13876 are separated by 1289 nucleotides13876 and 13877 are separated by 456 nucleotides mRNA_5505: 13873 - KOG0297 TNF receptor-associated factor, at 254,457 to 255,755 13873 mRNA_5506: 13874 - KOG2504 Monocarboxylate transporter, at 257,318 to 259,586 13874 mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259,685 to 261,151 13875 mRNA_5508: 13876 - KOG0297 TNF receptor-associated factor, at 262,441 to 263,588 13876 mRNA_5509: 13877 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 264,045 to 264,907 13877
Group Condition mRNA_5505 mRNA_5506 mRNA_5507 mRNA_5508 mRNA_5509
13873 13874 13875 13876 13877
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.0 -1.4 +0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.0 -0.7 +0.2 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 +0.0 +0.4 -0.9
auxotrophy Dropout Complete +0.1 -0.0 -0.4 +0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.1 +0.3 -0.5 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.4 +0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.1 -0.4 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.3 +0.1 +0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 -0.4 -0.2 +0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 -0.1 +0.2 -0.0
growth on oleic acid YNB Glucose -0.1 +0.3 -0.4 +0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.5 -1.0 +0.5 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.3 +0.0 +0.9
auxotrophy YNB Glucose -0.1 +0.0 +0.3 +0.4 -0.2
growth on ypd YPD -0.0 +0.3 +1.1 +0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.4 +0.1 +1.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 +0.8 +0.3 +1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +1.9 -0.0 +0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 +2.1 +0.2 +1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.4 +2.2 +0.1 +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 +2.5 +0.2 +0.8
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