Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13874 and 13875 are separated by 98 nucleotides13875 and 13876 are separated by 1289 nucleotides13876 and 13877 are separated by 456 nucleotides13877 and 13878 are separated by 735 nucleotides mRNA_5506: 13874 - KOG2504 Monocarboxylate transporter, at 257,318 to 259,586 13874 mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259,685 to 261,151 13875 mRNA_5508: 13876 - KOG0297 TNF receptor-associated factor, at 262,441 to 263,588 13876 mRNA_5509: 13877 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 264,045 to 264,907 13877 mRNA_5510: 13878 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 265,643 to 266,758 13878
Group Condition mRNA_5506 mRNA_5507 mRNA_5508 mRNA_5509 mRNA_5510
13874 13875 13876 13877 13878
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.7 +0.2 -1.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.0 +0.4 -0.9 -0.0
auxotrophy Dropout Complete -0.0 -0.4 +0.1 -0.4 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -1.4 +0.4 -0.2 +1.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.4 -0.2 +0.8 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 +0.0 +0.9 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 +0.3 -0.2 +0.4
growth on oleic acid YNB Oleic Acid +0.3 -0.5 -0.0 -0.1 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.4 +0.1 +1.2 -0.5
growth on ricinoleic acid YNB Glucose +0.1 -0.4 -0.1 +0.0 +0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.1 +0.4 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 +0.2 -0.0 +0.3
auxotrophy YNB Glucose +0.0 +0.3 +0.4 -0.2 +0.3
growth on oleic acid YNB Glucose +0.3 -0.4 +0.4 -0.1 +0.6
growth on ypd YPD +0.3 +1.1 +0.2 -0.6 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -1.0 +0.5 +0.6 +0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.8 +0.3 +1.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +1.9 -0.0 +0.9 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +2.1 +0.2 +1.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +2.5 +0.2 +0.8 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +2.2 +0.1 +1.0 +0.5
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