Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13875 and 13876 are separated by 1289 nucleotides13876 and 13877 are separated by 456 nucleotides13877 and 13878 are separated by 735 nucleotides13878 and 13879 are separated by 616 nucleotides mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259,685 to 261,151 13875 mRNA_5508: 13876 - KOG0297 TNF receptor-associated factor, at 262,441 to 263,588 13876 mRNA_5509: 13877 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 264,045 to 264,907 13877 mRNA_5510: 13878 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 265,643 to 266,758 13878 mRNA_5511: 13879 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 267,375 to 268,513 13879
Group Condition mRNA_5507 mRNA_5508 mRNA_5509 mRNA_5510 mRNA_5511
13875 13876 13877 13878 13879
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.2 -1.1 +0.1 -0.1
auxotrophy Dropout Complete -0.4 +0.1 -0.4 +0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.4 -0.9 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 +0.4 -0.2 +1.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.2 +0.8 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.5 -0.0 -0.1 +0.6 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.0 +0.9 -0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.3 -0.2 +0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.1 +0.0 +0.8 -0.2
growth on oleic acid YNB Glucose -0.4 +0.4 -0.1 +0.6 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 -0.0 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 +1.2 -0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 -0.2 -0.0 +0.2
auxotrophy YNB Glucose +0.3 +0.4 -0.2 +0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 +0.5 +0.6 +0.9 -0.2
growth on ypd YPD +1.1 +0.2 -0.6 +0.5 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 +0.3 +1.3 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.9 -0.0 +0.9 +0.5 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +2.5 +0.2 +0.8 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +2.2 +0.1 +1.0 +0.5 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +2.1 +0.2 +1.2 +0.3 -0.2
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