Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13876 and 13877 are separated by 456 nucleotides13877 and 13878 are separated by 735 nucleotides13878 and 13879 are separated by 616 nucleotides13879 and 13880 are separated by 456 nucleotides mRNA_5508: 13876 - KOG0297 TNF receptor-associated factor, at 262,441 to 263,588 13876 mRNA_5509: 13877 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 264,045 to 264,907 13877 mRNA_5510: 13878 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 265,643 to 266,758 13878 mRNA_5511: 13879 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 267,375 to 268,513 13879 mRNA_5512: 13880 - HMMPfam-PB1 domain-PF00564,HMMPfam-CBS domain-PF00571,ProSiteProfiles-CBS domain profile.-PS51371,SMART-Domain in cystathionine beta-synthase and other proteins.-SM00116,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF54631, at 268,970 to 271,571 13880
Group Condition mRNA_5508 mRNA_5509 mRNA_5510 mRNA_5511 mRNA_5512
13876 13877 13878 13879 13880
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -1.1 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.9 -0.0 +0.0 N.D.
auxotrophy Dropout Complete +0.1 -0.4 +0.3 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.8 -0.4 -0.1 N.D.
auxotrophy YNB Glucose +0.4 -0.2 +0.3 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.1 +0.6 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 +0.3 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.2 -0.0 +0.2 N.D.
growth on ypd YPD +0.2 -0.6 +0.5 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.9 -0.4 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.2 +0.4 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.0 +0.8 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.8 +0.2 -0.5 N.D.
growth on oleic acid YNB Glucose +0.4 -0.1 +0.6 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +1.2 -0.5 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.9 +0.5 -0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.2 +1.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +1.0 +0.5 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +1.2 +0.3 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +1.3 -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.6 +0.9 -0.2 N.D.
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