Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13878 and 13879 are separated by 616 nucleotides13879 and 13880 are separated by 456 nucleotides13880 and 13881 are separated by 531 nucleotides13881 and 13882 are separated by 122 nucleotides mRNA_5510: 13878 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 265,643 to 266,758 13878 mRNA_5511: 13879 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 267,375 to 268,513 13879 mRNA_5512: 13880 - HMMPfam-PB1 domain-PF00564,HMMPfam-CBS domain-PF00571,ProSiteProfiles-CBS domain profile.-PS51371,SMART-Domain in cystathionine beta-synthase and other proteins.-SM00116,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF54631, at 268,970 to 271,571 13880 mRNA_5513: 13881 - KOG4178 Soluble epoxide hydrolase, at 272,103 to 273,154 13881 mRNA_5514: 13882 - K03031 PSMD8, RPN12 26S proteasome regulatory subunit N12, at 273,277 to 274,802 13882
Group Condition mRNA_5510 mRNA_5511 mRNA_5512 mRNA_5513 mRNA_5514
13878 13879 13880 13881 13882
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.0 N.D. -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.5 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.1 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 N.D. +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.2 N.D. -0.1 N.D.
auxotrophy YNB Glucose +0.3 -0.2 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.5 N.D. +0.2 N.D.
auxotrophy Dropout Complete +0.3 -0.3 N.D. +0.2 N.D.
growth on oleic acid YNB Glucose +0.6 -0.3 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.5 N.D. +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.6 -0.2 N.D. -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.1 N.D. +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.1 N.D. +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.2 N.D. +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 -0.2 N.D. +0.2 N.D.
growth on ypd YPD +0.5 +0.2 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.8 -0.2 N.D. +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 -0.2 N.D. +0.3 N.D.
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