Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13882 and 13883 are separated by 377 nucleotides13883 and 13884 are separated by 155 nucleotides13884 and 13885 are separated by 2864 nucleotides13885 and 13886 are separated by 4750 nucleotides mRNA_5514: 13882 - K03031 PSMD8, RPN12 26S proteasome regulatory subunit N12, at 273,277 to 274,802 13882 mRNA_5515: 13883 - K02738 PSMB6 20S proteasome subunit beta 1, at 275,180 to 276,108 13883 mRNA_5516: 13884 - Hypothetical Protein, at 276,264 to 277,474 13884 mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280,339 to 282,741 13885 mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287,492 to 288,002 13886
Group Condition mRNA_5514 mRNA_5515 mRNA_5516 mRNA_5517 mRNA_5518
13882 13883 13884 13885 13886
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.7 +0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.9 -0.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.7 -0.4 +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.2 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.0 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.3 +0.4 -0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.1 -0.2 +0.3
auxotrophy Dropout Complete N.D. N.D. -0.4 -0.0 +0.6
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.2 -0.2 +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.0 +0.3 -0.0
growth on ypd YPD N.D. N.D. +0.0 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 -0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.0 -0.0 +0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.3 -0.4 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.7 +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.2 +0.1 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.2 -0.1 +0.9
auxotrophy YNB Glucose N.D. N.D. +0.3 +0.1 +0.8
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