Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13883 and 13884 are separated by 155 nucleotides13884 and 13885 are separated by 2864 nucleotides13885 and 13886 are separated by 4750 nucleotides13886 and 13887 are separated by 666 nucleotides mRNA_5515: 13883 - K02738 PSMB6 20S proteasome subunit beta 1, at 275,180 to 276,108 13883 mRNA_5516: 13884 - Hypothetical Protein, at 276,264 to 277,474 13884 mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280,339 to 282,741 13885 mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287,492 to 288,002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288,669 to 289,832 13887
Group Condition mRNA_5515 mRNA_5516 mRNA_5517 mRNA_5518 mRNA_5519
13883 13884 13885 13886 13887
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.7 +0.2 -0.5 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.9 -0.4 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.7 -0.4 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 +0.3 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 +0.4 -0.1 -0.3
growth on oleic acid YNB Glucose N.D. +0.1 -0.2 +0.3 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.2 +0.2 +0.2
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.2 +0.6 -0.1
auxotrophy Dropout Complete N.D. -0.4 -0.0 +0.6 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 +0.3 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.0 +0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.2 +0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.7 +0.0 +0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.1 +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.1 +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.0 +0.7 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.1 +0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.1 +0.9 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 -0.4 +0.7 +0.4
auxotrophy YNB Glucose N.D. +0.3 +0.1 +0.8 -0.1
growth on ypd YPD N.D. +0.0 +0.1 +0.2 +0.8
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