Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13884 and 13885 are separated by 2864 nucleotides13885 and 13886 are separated by 4750 nucleotides13886 and 13887 are separated by 666 nucleotides13887 and 13888 are separated by 464 nucleotides mRNA_5516: 13884 - Hypothetical Protein, at 276,264 to 277,474 13884 mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280,339 to 282,741 13885 mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287,492 to 288,002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288,669 to 289,832 13887 mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290,297 to 291,417 13888
Group Condition mRNA_5516 mRNA_5517 mRNA_5518 mRNA_5519 mRNA_5520
13884 13885 13886 13887 13888
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +0.2 -0.5 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.4 +0.3 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.3 -0.4 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.4 +0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.4 -0.1 -0.3 -0.1
growth on oleic acid YNB Glucose +0.1 -0.2 +0.3 -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.2 +0.6 -0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +0.2 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.3 -0.0 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.0 +0.1 -0.5 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 +0.2 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.4 -0.2 +0.1
auxotrophy Dropout Complete -0.4 -0.0 +0.6 +0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 +0.7 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 +0.3 +0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 +0.4 -0.2 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.6 -0.2 +0.1
growth on ypd YPD +0.0 +0.1 +0.2 +0.8 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 +0.9 -0.1 +0.3
auxotrophy YNB Glucose +0.3 +0.1 +0.8 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.4 +0.7 +0.4 +0.4
remove
mRNA_5516
plot
remove
mRNA_5517
plot
remove
mRNA_5518
remove
mRNA_5519
plot
remove
mRNA_5520
plot