Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13885 and 13886 are separated by 4750 nucleotides13886 and 13887 are separated by 666 nucleotides13887 and 13888 are separated by 464 nucleotides13888 and 13889 are separated by 482 nucleotides mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280,339 to 282,741 13885 mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287,492 to 288,002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288,669 to 289,832 13887 mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290,297 to 291,417 13888 mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291,900 to 293,030 13889
Group Condition mRNA_5517 mRNA_5518 mRNA_5519 mRNA_5520 mRNA_5521
13885 13886 13887 13888 13889
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.5 -0.4 -0.3 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 -0.5 -0.3 +0.2
growth on oleic acid YNB Glucose -0.2 +0.3 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.4 -0.2 -0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 -0.1 -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.6 -0.1 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 +0.3 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.4 -0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 -0.3 -0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.3 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 -0.1 -0.2 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.7 -0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.4 -0.2 +0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 +0.1 +0.4 +0.0
auxotrophy Dropout Complete -0.0 +0.6 +0.0 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.6 -0.2 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.9 -0.1 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.7 +0.4 +0.4 -0.1
auxotrophy YNB Glucose +0.1 +0.8 -0.1 +0.2 +0.1
growth on ypd YPD +0.1 +0.2 +0.8 +0.0 +0.2
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