Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13886 and 13887 are separated by 666 nucleotides13887 and 13888 are separated by 464 nucleotides13888 and 13889 are separated by 482 nucleotides13889 and 13890 are separated by 489 nucleotides mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287,492 to 288,002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288,669 to 289,832 13887 mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290,297 to 291,417 13888 mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291,900 to 293,030 13889 mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293,520 to 294,673 13890
Group Condition mRNA_5518 mRNA_5519 mRNA_5520 mRNA_5521 mRNA_5522
13886 13887 13888 13889 13890
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.4 -0.3 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 -0.1 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 -0.1 +0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 -0.3 +0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 -0.1 -0.1 -0.0
growth on oleic acid YNB Glucose +0.3 -0.1 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.2 +0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 -0.2 +0.4 +0.1
growth on oleic acid YNB Oleic Acid +0.6 -0.1 -0.2 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.7 -0.0 -0.1 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 +0.1 -0.2 -0.1
growth on ricinoleic acid YNB Glucose +0.2 +0.2 +0.0 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 +0.1 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.2 +0.1 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 -0.1 +0.3 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 +0.4 +0.0 +0.0
auxotrophy Dropout Complete +0.6 +0.0 +0.3 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.2 +0.5 -0.0 +0.4
growth on ypd YPD +0.2 +0.8 +0.0 +0.2 -0.1
auxotrophy YNB Glucose +0.8 -0.1 +0.2 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.7 +0.4 +0.4 -0.1 +0.2
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