Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13887 and 13888 are separated by 464 nucleotides13888 and 13889 are separated by 482 nucleotides13889 and 13890 are separated by 489 nucleotides13890 and 13891 are separated by 484 nucleotides mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288,669 to 289,832 13887 mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290,297 to 291,417 13888 mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291,900 to 293,030 13889 mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293,520 to 294,673 13890 mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295,158 to 296,227 13891
Group Condition mRNA_5519 mRNA_5520 mRNA_5521 mRNA_5522 mRNA_5523
13887 13888 13889 13890 13891
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.1 -0.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 +0.1 -0.0 -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.2 -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.0 -0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.3 +0.2 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 -0.1 -0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -0.0 -0.0 -0.1
growth on oleic acid YNB Glucose -0.1 -0.1 -0.1 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 +0.4 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 +0.3 -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.4 -0.1 +0.2 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.1 -0.2 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 +0.1 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 +0.4 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.0 +0.1 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.3 +0.5 +0.2 +0.5
auxotrophy Dropout Complete +0.0 +0.3 -0.1 +0.2 +0.3
auxotrophy YNB Glucose -0.1 +0.2 +0.1 +0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 +0.0 +0.0 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.5 -0.0 +0.4 +0.3
growth on ypd YPD +0.8 +0.0 +0.2 -0.1 +0.1
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