Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13888 and 13889 are separated by 482 nucleotides13889 and 13890 are separated by 489 nucleotides13890 and 13891 are separated by 484 nucleotides13891 and 13892 are separated by 844 nucleotides mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290,297 to 291,417 13888 mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291,900 to 293,030 13889 mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293,520 to 294,673 13890 mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295,158 to 296,227 13891 mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297,072 to 298,317 13892
Group Condition mRNA_5520 mRNA_5521 mRNA_5522 mRNA_5523 mRNA_5524
13888 13889 13890 13891 13892
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.0 -0.5 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.0 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 -0.1 +0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 -0.1 -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.0 -0.7 +0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.0 -0.0 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 -0.3 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 -0.2 +0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 +0.2 -0.7 -0.0
growth on oleic acid YNB Glucose -0.1 -0.1 -0.0 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.4 +0.1 +0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.2 +0.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 -0.0 +0.2 -0.1
growth on ricinoleic acid YNB Glucose +0.0 +0.1 -0.0 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.5 +0.2 +0.5 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.0 +0.0 +0.4 -0.5
auxotrophy Dropout Complete +0.3 -0.1 +0.2 +0.3 -0.2
growth on ypd YPD +0.0 +0.2 -0.1 +0.1 +0.2
auxotrophy YNB Glucose +0.2 +0.1 +0.3 +0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 -0.1 +0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.0 +0.4 +0.3 -0.5
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