Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13889 and 13890 are separated by 489 nucleotides13890 and 13891 are separated by 484 nucleotides13891 and 13892 are separated by 844 nucleotides13892 and 13893 are separated by 852 nucleotides mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291,900 to 293,030 13889 mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293,520 to 294,673 13890 mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295,158 to 296,227 13891 mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297,072 to 298,317 13892 mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299,170 to 301,469 13893
Group Condition mRNA_5521 mRNA_5522 mRNA_5523 mRNA_5524 mRNA_5525
13889 13890 13891 13892 13893
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.5 -0.6 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -0.4 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 +0.0 -0.5 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 -0.7 +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.3 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 -0.7 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.2 +0.2 -0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.3 -0.0 -0.0 +0.2
growth on oleic acid YNB Glucose -0.1 -0.0 +0.3 -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.0 -0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.0 +0.4 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.4 +0.3 -0.5 -0.1
auxotrophy Dropout Complete -0.1 +0.2 +0.3 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.1 +0.2 -0.4 -0.0
auxotrophy YNB Glucose +0.1 +0.3 +0.3 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 +0.2 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.3 -0.2 +0.1 -0.0
growth on ricinoleic acid YNB Glucose +0.1 -0.0 +0.2 +0.0 +0.1
growth on ypd YPD +0.2 -0.1 +0.1 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 +0.0 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.2 +0.5 -0.6 -0.1
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