Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13890 and 13891 are separated by 484 nucleotides13891 and 13892 are separated by 844 nucleotides13892 and 13893 are separated by 852 nucleotides13893 and 13894 are separated by 239 nucleotides mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293,520 to 294,673 13890 mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295,158 to 296,227 13891 mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297,072 to 298,317 13892 mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299,170 to 301,469 13893 mRNA_5526: 13894 - K00052 leuB 3-isopropylmalate dehydrogenase, at 301,709 to 303,276 13894
Group Condition mRNA_5522 mRNA_5523 mRNA_5524 mRNA_5525 mRNA_5526
13890 13891 13892 13893 13894
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 -0.6 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 -0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 -0.6 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.7 +0.1 -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.0 -0.5 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.7 -0.0 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.0 -0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.4 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 -0.5 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.1 +0.0 N.D.
growth on oleic acid YNB Glucose -0.0 +0.3 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.5 -0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 -0.5 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 +0.1 -0.0 N.D.
auxotrophy YNB Glucose +0.3 +0.3 -0.4 -0.0 N.D.
growth on ypd YPD -0.1 +0.1 +0.2 +0.0 N.D.
auxotrophy Dropout Complete +0.2 +0.3 -0.2 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.2 +0.0 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.0 +0.3 +0.2 N.D.
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