Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13892 and 13893 are separated by 852 nucleotides13893 and 13894 are separated by 239 nucleotides13894 and 13895 are separated by 420 nucleotides13895 and 13896 are separated by 279 nucleotides mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297,072 to 298,317 13892 mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299,170 to 301,469 13893 mRNA_5526: 13894 - K00052 leuB 3-isopropylmalate dehydrogenase, at 301,709 to 303,276 13894 mRNA_5527: 13895 - K11883 NOB1 RNA-binding protein NOB1, at 303,697 to 305,493 13895 mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305,773 to 306,425 13896
Group Condition mRNA_5524 mRNA_5525 mRNA_5526 mRNA_5527 mRNA_5528
13892 13893 13894 13895 13896
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 N.D. N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.0 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.2 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1 N.D. N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.6 +0.1 N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.0 N.D. N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 N.D. N.D. -0.3
auxotrophy YNB Glucose -0.4 -0.0 N.D. N.D. -0.0
auxotrophy Dropout Complete -0.2 +0.0 N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 N.D. N.D. -0.0
growth on oleic acid YNB Glucose -0.2 -0.1 N.D. N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.0 N.D. N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 N.D. N.D. -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 N.D. N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.0 +0.1 N.D. N.D. +0.1
growth on ypd YPD +0.2 +0.0 N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 N.D. N.D. +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.0 N.D. N.D. +0.6
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