Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13899 and 13900 are separated by 36 nucleotides13900 and 13901 are separated by 172 nucleotides13901 and 13902 are separated by 197 nucleotides13902 and 13903 are separated by 364 nucleotides mRNA_5531: 13899 - K03800 lplA, lplJ lipoate---protein ligase, at 310,956 to 312,571 13899 mRNA_5532: 13900 - K01519 ITPA inosine triphosphate pyrophosphatase, at 312,608 to 313,852 13900 mRNA_5533: 13901 - Hypothetical Protein, at 314,025 to 315,738 13901 mRNA_5534: 13902 - K18798 AFG1, LACE1 peroxisome-assembly ATPase, at 315,936 to 317,983 13902 mRNA_5535: 13903 - K15305 VAC14, TAX1BP2 vacuole morphology and inheritance protein 14, at 318,348 to 322,384 13903
Group Condition mRNA_5531 mRNA_5532 mRNA_5533 mRNA_5534 mRNA_5535
13899 13900 13901 13902 13903
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 -1.2 -0.2 +0.0
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.5 -1.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.8 +0.2 +0.3
growth on oleic acid YNB Glucose N.D. -0.3 -0.4 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.5 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.6 -0.4 +0.9
growth on ypd YPD N.D. +0.6 -0.5 -0.5 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 +0.1 +0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 -0.2 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.9 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 +0.4 -0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.1 -0.4 +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.3 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.4 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.1 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.0 +0.3 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.4 -0.2 +0.2 +0.3
auxotrophy Dropout Complete N.D. -0.2 -0.2 +0.6 +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 +0.5 +0.6 +0.3
auxotrophy YNB Glucose N.D. +0.1 +0.3 +0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 +0.7 +0.7 -0.2
remove
mRNA_5531
plot
remove
mRNA_5532
plot
remove
mRNA_5533
remove
mRNA_5534
plot
remove
mRNA_5535
plot