Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13904 and 13905 are separated by 134 nucleotides
13905 and 13906 are separated by 292 nucleotides
13906 and 13907 are separated by 299 nucleotides
13907 and 13908 are separated by 723 nucleotides
mRNA_5536: 13904 - Hypothetical Protein, at 322,636 to 323,526
13904
mRNA_5537: 13905 - K14766 NOP14, UTP2 nucleolar protein 14, at 323,661 to 327,159
13905
mRNA_5538: 13906 - Hypothetical Protein, at 327,452 to 328,556
13906
mRNA_5539: 13907 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 328,856 to 330,220
13907
mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330,944 to 333,027
13908
Group
Condition
mRNA
_5536
mRNA
_5537
mRNA
_5538
mRNA
_5539
mRNA
_5540
13904
13905
13906
13907
13908
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
N.D.
-0.3
-0.7
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
N.D.
-0.0
-0.2
+0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
-0.2
-0.0
-0.0
growth on oleic acid
YNB Glucose
-0.4
N.D.
-0.1
+0.3
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
-0.2
-0.2
+0.9
growth on oleic acid
YNB Oleic Acid
-0.7
N.D.
+0.1
-0.1
+1.0
auxotrophy
YNB Glucose 75mM Arginine
-0.5
N.D.
+0.3
+0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.5
N.D.
-0.3
+0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
N.D.
-0.2
-0.1
+1.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.2
-0.2
+0.7
auxotrophy
YNB Glucose
-0.6
N.D.
+0.5
+0.0
+0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.5
N.D.
+0.4
+0.4
+0.4
growth on ricinoleic acid
YNB Glucose
-0.6
N.D.
+0.0
+0.2
+1.1
auxotrophy
Dropout Complete
-0.5
N.D.
+0.3
+0.2
+0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.8
N.D.
+0.2
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.1
N.D.
+0.0
-0.1
-0.1
growth on ypd
YPD
+0.8
N.D.
-0.3
-0.1
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
-0.1
-0.1
+1.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.1
N.D.
-0.2
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.5
N.D.
-0.1
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
N.D.
+0.0
-0.2
+2.0
remove
mRNA_5536
plot
remove
mRNA_5537
plot
remove
mRNA_5538
remove
mRNA_5539
plot
remove
mRNA_5540
plot