Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13906 and 13907 are separated by 299 nucleotides13907 and 13908 are separated by 723 nucleotides13908 and 13909 are separated by 404 nucleotides13909 and 13910 are separated by 176 nucleotides mRNA_5538: 13906 - Hypothetical Protein, at 327,452 to 328,556 13906 mRNA_5539: 13907 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 328,856 to 330,220 13907 mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330,944 to 333,027 13908 mRNA_5541: 13909 - K02482 K02482 two-component system, NtrC family, sensor kinase, at 333,432 to 336,799 13909 mRNA_5542: 13910 - Hypothetical Protein, at 336,976 to 338,321 13910
Group Condition mRNA_5538 mRNA_5539 mRNA_5540 mRNA_5541 mRNA_5542
13906 13907 13908 13909 13910
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.7 -0.4 -0.8 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 +0.1 -0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 +0.2 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.0 +0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.0 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 +0.7 -0.4 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 +0.9 +0.0 -0.0
growth on oleic acid YNB Glucose -0.1 +0.3 +0.4 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 +0.7 -0.2 +0.4
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +1.0 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 +0.5 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 +1.1 -0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.4 +0.4 -0.1 +0.1
auxotrophy YNB Glucose +0.5 +0.0 +0.7 +0.1 -0.1
growth on ypd YPD -0.3 -0.1 +0.7 +0.5 +0.5
growth on ricinoleic acid YNB Glucose +0.0 +0.2 +1.1 -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 +1.7 -0.2 +0.1
auxotrophy Dropout Complete +0.3 +0.2 +0.8 -0.0 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.2 +2.0 -0.1 +0.1
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