Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13909 and 13910 are separated by 176 nucleotides13910 and 13911 are separated by 315 nucleotides13911 and 13912 are separated by 640 nucleotides13912 and 13913 are separated by 1199 nucleotides mRNA_5541: 13909 - K02482 K02482 two-component system, NtrC family, sensor kinase, at 333,432 to 336,799 13909 mRNA_5542: 13910 - Hypothetical Protein, at 336,976 to 338,321 13910 mRNA_5543: 13911 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 338,637 to 339,590 13911 mRNA_5544: 13912 - Hypothetical Protein, at 340,231 to 341,133 13912 mRNA_5545: 13913 - Hypothetical Protein, at 342,333 to 343,433 13913
Group Condition mRNA_5541 mRNA_5542 mRNA_5543 mRNA_5544 mRNA_5545
13909 13910 13911 13912 13913
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.0 +1.1 -2.3 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.0 -0.8 -0.0 -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 -0.7 -0.0 -0.3
growth on oleic acid YNB Glucose -0.1 +0.0 -0.0 -0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.0 +0.1 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 +0.1 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 +0.8 -0.8 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 +0.1 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 +0.7 -0.6 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.3 +0.2 +0.3 -0.4
growth on ricinoleic acid YNB Glucose -0.1 +0.2 +0.2 -0.5 +0.2
auxotrophy YNB Glucose +0.1 -0.1 -0.4 +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.1 +0.4 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 +0.1 +0.4 +0.0
auxotrophy Dropout Complete -0.0 +0.4 -0.7 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 +1.5 -0.1 -0.2
growth on ypd YPD +0.5 +0.5 -0.9 -0.2 +0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 +0.4 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 +0.8 -0.5 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 +1.6 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +1.5 -0.2 +0.4
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