Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13916 and 13917 are separated by 804 nucleotides13917 and 13918 are separated by 1411 nucleotides13918 and 13919 are separated by 343 nucleotides13919 and 13920 are separated by 872 nucleotides mRNA_5548: 13916 - KOG4006 Anti-proliferation factor BTG1/TOB, at 346,631 to 348,391 13916 mRNA_5549: 13917 - K00027 ME2, sfcA, maeA malate dehydrogenase (oxaloacetate-decarboxylating), at 349,196 to 351,953 13917 mRNA_5550: 13918 - K09424 REB1 Myb-like DNA-binding protein REB1, at 353,365 to 355,997 13918 mRNA_5551: 13919 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 356,341 to 358,990 13919 mRNA_5552: 13920 - K03360 GRR1 F-box and leucine-rich repeat protein GRR1, at 359,863 to 362,993 13920
Group Condition mRNA_5548 mRNA_5549 mRNA_5550 mRNA_5551 mRNA_5552
13916 13917 13918 13919 13920
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.4 -2.0 -0.4 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 +0.3 -1.3 -0.5 -1.4
growth on ypd YPD +0.1 -0.1 -2.5 -0.2 +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.2 -1.8 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.5 -1.1 -0.1 +1.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 -0.8 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.0 -0.6 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 -0.2 +0.2 -0.8
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.3 -1.0 -0.1 -0.3
auxotrophy Dropout Complete +1.1 +0.5 -0.2 +0.2 -1.6
growth on oleic acid YNB Glucose +0.5 -0.2 +0.4 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.7 +0.2 +0.5 +0.1 -0.9
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 +0.8 -0.2 -0.3
growth on ricinoleic acid YNB Glucose +0.9 -0.1 -0.0 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +1.2 +0.5 -0.3 +0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine +1.3 +0.4 +0.2 +0.4 -0.8
growth on oleic acid YNB Oleic Acid +1.2 -0.2 +0.9 +0.1 -0.5
auxotrophy YNB Glucose +1.2 +0.3 +0.9 +0.2 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.2 -0.3 -0.3 +1.9
growth on ricinoleic acid YNB Ricinoleic Acid +2.1 +0.2 +0.9 +0.2 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid +1.6 -0.0 +1.3 +0.3 -0.7
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