Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13925 and 13926 are separated by 435 nucleotides13926 and 13927 are separated by 86 nucleotides13927 and 13928 are separated by 80 nucleotides13928 and 13929 are separated by 689 nucleotides mRNA_5557: 13925 - K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, at 375,495 to 376,430 13925 mRNA_5558: 13926 - KOG3328 HGG motif-containing thioesterase, at 376,866 to 377,685 13926 mRNA_5559: 13927 - KOG2406 MADS box transcription factor, at 377,772 to 380,881 13927 mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380,962 to 381,944 13928 mRNA_5561: 13929 - Hypothetical Protein, at 382,634 to 383,572 13929
Group Condition mRNA_5557 mRNA_5558 mRNA_5559 mRNA_5560 mRNA_5561
13925 13926 13927 13928 13929
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.0 N.D. -3.0 -2.2
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.9 N.D. -1.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 +0.3 N.D. -0.9 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 -0.1 N.D. -0.6 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 -0.5 N.D. +0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.8 +0.1 N.D. -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.6 N.D. -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.7 +0.1 N.D. -0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.8 +0.2 N.D. +0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 -0.8 N.D. +0.3 -1.0
auxotrophy YNB Glucose -0.3 -0.4 N.D. +0.4 -0.4
growth on ypd YPD +0.5 -0.3 N.D. -0.8 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 N.D. +0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. -0.5 -0.1
growth on oleic acid YNB Glucose -0.3 +0.0 N.D. +0.2 -0.4
auxotrophy Dropout Complete -0.2 -0.2 N.D. +0.6 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 N.D. +0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.7 N.D. +0.8 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 N.D. -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 N.D. +0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.4 N.D. +1.0 +0.1
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