Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13927 and 13928 are separated by 80 nucleotides13928 and 13929 are separated by 689 nucleotides13929 and 13930 are separated by 200 nucleotides13930 and 13931 are separated by 384 nucleotides mRNA_5559: 13927 - KOG2406 MADS box transcription factor, at 377,772 to 380,881 13927 mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380,962 to 381,944 13928 mRNA_5561: 13929 - Hypothetical Protein, at 382,634 to 383,572 13929 mRNA_5562: 13930 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 383,773 to 385,239 13930 mRNA_5563: 13931 - K10756 RFC3_5 replication factor C subunit 3/5, at 385,624 to 387,371 13931
Group Condition mRNA_5559 mRNA_5560 mRNA_5561 mRNA_5562 mRNA_5563
13927 13928 13929 13930 13931
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -3.0 -2.2 -0.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.5 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.9 -0.4 -0.2 N.D.
growth on ypd YPD N.D. -0.8 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.5 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.3 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.6 -0.0 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 -0.6 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.0 -0.6 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 -1.0 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.0 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.5 -0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.4 -0.2 +0.3 N.D.
auxotrophy YNB Glucose N.D. +0.4 -0.4 -0.2 N.D.
growth on oleic acid YNB Glucose N.D. +0.2 -0.4 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 -0.3 -0.2 N.D.
auxotrophy Dropout Complete N.D. +0.6 -0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 +0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +1.0 +0.1 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.8 +0.1 -0.2 N.D.
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