Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13928 and 13929 are separated by 689 nucleotides13929 and 13930 are separated by 200 nucleotides13930 and 13931 are separated by 384 nucleotides13931 and 13932 are separated by 101 nucleotides mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380,962 to 381,944 13928 mRNA_5561: 13929 - Hypothetical Protein, at 382,634 to 383,572 13929 mRNA_5562: 13930 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 383,773 to 385,239 13930 mRNA_5563: 13931 - K10756 RFC3_5 replication factor C subunit 3/5, at 385,624 to 387,371 13931 mRNA_5564: 13932 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 387,473 to 390,458 13932
Group Condition mRNA_5560 mRNA_5561 mRNA_5562 mRNA_5563 mRNA_5564
13928 13929 13930 13931 13932
ypd buoyancy 40 hrs No Buoyancy Separation -3.0 -2.2 -0.8 N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.4 -0.2 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.1 -0.1 N.D. +0.2
growth on ypd YPD -0.8 -0.1 -0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 -0.2 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.1 -0.2 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 -0.6 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.0 -0.0 N.D. +0.0
growth on ricinoleic acid YNB Glucose +0.0 -0.6 -0.0 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.5 -0.1 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 -0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.4 -0.2 +0.3 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -1.0 +0.2 N.D. +0.2
auxotrophy YNB Glucose +0.4 -0.4 -0.2 N.D. -0.1
growth on oleic acid YNB Glucose +0.2 -0.4 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.3 -0.2 N.D. -0.1
auxotrophy Dropout Complete +0.6 -0.3 -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 +0.1 -0.2 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.1 -0.3 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 +0.1 -0.4 N.D. -0.0
remove
mRNA_5560
plot
remove
mRNA_5561
plot
remove
mRNA_5562
remove
mRNA_5563
plot
remove
mRNA_5564
plot