Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13929 and 13930 are separated by 200 nucleotides13930 and 13931 are separated by 384 nucleotides13931 and 13932 are separated by 101 nucleotides13932 and 13933 are separated by 1200 nucleotides mRNA_5561: 13929 - Hypothetical Protein, at 382,634 to 383,572 13929 mRNA_5562: 13930 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 383,773 to 385,239 13930 mRNA_5563: 13931 - K10756 RFC3_5 replication factor C subunit 3/5, at 385,624 to 387,371 13931 mRNA_5564: 13932 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 387,473 to 390,458 13932 mRNA_5565: 13933 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 391,659 to 392,676 13933
Group Condition mRNA_5561 mRNA_5562 mRNA_5563 mRNA_5564 mRNA_5565
13929 13930 13931 13932 13933
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 -0.8 N.D. -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 N.D. -0.2 -0.4
auxotrophy YNB Glucose -0.4 -0.2 N.D. -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.6 -0.0 N.D. +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.2 N.D. +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 N.D. -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 N.D. -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.6 N.D. -0.0 +0.1
growth on ypd YPD -0.1 -0.1 N.D. +0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 N.D. -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 N.D. -0.0 -0.2
auxotrophy Dropout Complete -0.3 -0.2 N.D. -0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 N.D. +0.2 -0.3
growth on oleic acid YNB Glucose -0.4 +0.1 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. -0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.0 N.D. +0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 N.D. -0.0 +0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.3 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 N.D. +0.4 -0.1
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