Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13938 and 13939 are separated by 206 nucleotides13939 and 13940 are separated by 397 nucleotides13940 and 13941 are separated by 367 nucleotides13941 and 13942 are separated by 1911 nucleotides mRNA_5570: 13938 - K06067 HDAC1_2 histone deacetylase 1/2, at 399,570 to 402,274 13938 mRNA_5571: 13939 - K14546 UTP5, WDR43 U3 small nucleolar RNA-associated protein 5, at 402,481 to 405,282 13939 mRNA_5572: 13940 - K18730 GIGYF PERQ amino acid-rich with GYF domain-containing protein, at 405,680 to 409,565 13940 mRNA_5573: 13941 - BLAST Protein priA [Hypsizygus marmoreus], at 409,933 to 411,114 13941 mRNA_5574: 13942 - K02956 RP-S15, MRPS15, rpsO small subunit ribosomal protein S15, at 413,026 to 414,164 13942
Group Condition mRNA_5570 mRNA_5571 mRNA_5572 mRNA_5573 mRNA_5574
13938 13939 13940 13941 13942
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -1.1 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -1.9 -0.1 +0.2 N.D.
growth on ypd YPD -0.2 -0.6 -0.0 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 -0.4 -0.3 N.D.
growth on oleic acid YNB Glucose -0.0 -0.3 +0.2 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.2 -0.2 N.D.
auxotrophy Dropout Complete +0.1 -0.6 +0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.1 -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.5 -0.3 +0.5 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 -0.2 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.7 +0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.2 -0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.1 -0.2 N.D.
auxotrophy YNB Glucose +0.3 -0.2 -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.4 -0.5 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.5 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 +0.8 -1.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.9 +0.0 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.5 +0.4 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.9 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +1.4 -0.1 -0.1 N.D.
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