Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13944 and 13945 are separated by 616 nucleotides13945 and 13946 are separated by 396 nucleotides13946 and 13947 are separated by 1210 nucleotides13947 and 13948 are separated by 791 nucleotides mRNA_5576: 13944 - Interpro GDP-fucose protein O-fucosyltransferase, at 415,685 to 417,537 13944 mRNA_5577: 13945 - Hypothetical Protein, at 418,154 to 419,235 13945 mRNA_5578: 13946 - HMMPfam-HMG (high mobility group) box-PF00505,ProSiteProfiles-HMG boxes A and B DNA-binding domains profile.-PS50118,SMART-high mobility group-SM00398,SUPERFAMILY--SSF47095, at 419,632 to 421,061 13946 mRNA_5579: 13947 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 422,272 to 423,518 13947 mRNA_5580: 13948 - K00162 PDHB, pdhB pyruvate dehydrogenase E1 component beta subunit, at 424,310 to 425,729 13948
Group Condition mRNA_5576 mRNA_5577 mRNA_5578 mRNA_5579 mRNA_5580
13944 13945 13946 13947 13948
auxotrophy YNB Glucose -0.5 +0.2 N.D. -0.7 N.D.
auxotrophy Dropout Complete -0.1 +0.3 N.D. -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 N.D. -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 N.D. -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.5 +0.5 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.0 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.2 N.D. +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.6 N.D. -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.3 +0.1 N.D. +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.2 N.D. +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 N.D. +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.1 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 N.D. +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 N.D. -0.1 N.D.
growth on ypd YPD +0.0 -0.1 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.5 N.D. +0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.2 N.D. +0.7 N.D.
growth on oleic acid YNB Glucose +0.0 +0.5 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.5 N.D. +0.5 N.D.
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