Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13948 and 13949 are separated by 760 nucleotides13949 and 13950 are separated by 366 nucleotides13950 and 13951 are separated by 448 nucleotides13951 and 13952 are separated by 117 nucleotides mRNA_5580: 13948 - K00162 PDHB, pdhB pyruvate dehydrogenase E1 component beta subunit, at 424,310 to 425,729 13948 mRNA_5581: 13949 - KOG1198 Zinc-binding oxidoreductase, at 426,490 to 430,753 13949 mRNA_5582: 13950 - KOG0254 Predicted transporter (major facilitator superfamily), at 431,120 to 432,974 13950 mRNA_5583: 13951 - BLAST putative ATP-dependent RNA helicase DHR1 [Wallemi..., at 433,423 to 434,660 13951 mRNA_5584: 13952 - K14780 DHX37, DHR1 ATP-dependent RNA helicase DHX37/DHR1, at 434,778 to 438,176 13952
Group Condition mRNA_5580 mRNA_5581 mRNA_5582 mRNA_5583 mRNA_5584
13948 13949 13950 13951 13952
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.5 -0.5 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.5 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.3 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 -0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.2 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.4 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.5 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.5 +0.1 N.D. N.D.
growth on ypd YPD N.D. +0.5 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.8 +0.1 N.D. N.D.
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