Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13951 and 13952 are separated by 117 nucleotides13952 and 13953 are separated by 769 nucleotides13953 and 13954 are separated by 1032 nucleotides13954 and 13955 are separated by 234 nucleotides mRNA_5583: 13951 - BLAST putative ATP-dependent RNA helicase DHR1 [Wallemi..., at 433,423 to 434,660 13951 mRNA_5584: 13952 - K14780 DHX37, DHR1 ATP-dependent RNA helicase DHX37/DHR1, at 434,778 to 438,176 13952 mRNA_5585: 13953 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 438,946 to 439,812 13953 mRNA_5586: 13954 - HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874, at 440,845 to 442,225 13954 mRNA_5587: 13955 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 442,460 to 444,934 13955
Group Condition mRNA_5583 mRNA_5584 mRNA_5585 mRNA_5586 mRNA_5587
13951 13952 13953 13954 13955
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.2 -0.4 -0.6
auxotrophy YNB Glucose N.D. N.D. -0.1 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.5 +0.0 +0.1
auxotrophy Dropout Complete N.D. N.D. -0.0 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 -0.0 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.5 -0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.4 -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.3 +0.1 +0.2
growth on oleic acid YNB Glucose N.D. N.D. +0.3 -0.1 -0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.2 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.5 +0.0 +0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.0 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.2 -0.0 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.2 +0.1 +0.3
growth on ypd YPD N.D. N.D. +0.2 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.1 +0.4 +0.3
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