Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13958 and 13959 are separated by 1071 nucleotides13959 and 13960 are separated by 255 nucleotides13960 and 13961 are separated by 63 nucleotides13961 and 13962 are separated by 261 nucleotides mRNA_5590: 13958 - K11137 TELO2, TEL2 telomere length regulation protein, at 453,497 to 457,057 13958 mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458,129 to 461,343 13959 mRNA_5592: 13960 - HMMPfam-Alcohol acetyltransferase-PF07247,SUPERFAMILY--SSF52777, at 461,599 to 463,064 13960 mRNA_5593: 13961 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 463,128 to 464,888 13961 mRNA_5594: 13962 - K07943 ARL2 ADP-ribosylation factor-like protein 2, at 465,150 to 466,141 13962
Group Condition mRNA_5590 mRNA_5591 mRNA_5592 mRNA_5593 mRNA_5594
13958 13959 13960 13961 13962
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -0.2 -0.3 -1.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 +0.4 -0.3 -1.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 -0.4 +0.0 -0.6
auxotrophy YNB Glucose N.D. +0.0 -0.5 -0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.3 -0.0 -0.6
growth on oleic acid YNB Glucose N.D. +0.1 -0.7 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.4 +0.1 -1.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.0 -0.1 -0.5
auxotrophy Dropout Complete N.D. +0.0 +0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.2 +0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.4 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.4 -0.0 +0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.7 +0.1 -0.8
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.8 -0.1 +1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 +0.6 -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.2 +0.3 +0.1
growth on ypd YPD N.D. +0.2 +0.5 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 -0.5 +0.0 +1.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.0 +0.2 +1.0
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