Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13967 and 13968 are separated by 646 nucleotides13968 and 13969 are separated by 267 nucleotides13969 and 13970 are separated by 628 nucleotides13970 and 13971 are separated by 339 nucleotides mRNA_5599: 13967 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 475,591 to 478,385 13967 mRNA_5600: 13968 - BLAST polysaccharide lyase family 14 protein [Sistotremastr..., at 479,032 to 480,783 13968 mRNA_5601: 13969 - K15014 SLC29A1_2_3, ENT1_2_3 solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3, at 481,051 to 483,053 13969 mRNA_5602: 13970 - HMMPfam-AAA-ATPase Vps4-associated protein 1-PF08432, at 483,682 to 484,493 13970 mRNA_5603: 13971 - K09523 DNAJC3 DnaJ homolog subfamily C member 3, at 484,833 to 486,890 13971
Group Condition mRNA_5599 mRNA_5600 mRNA_5601 mRNA_5602 mRNA_5603
13967 13968 13969 13970 13971
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 +0.3 N.D. -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 -0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.5 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.0 +0.6 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 +0.4 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 -0.3 N.D. +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.2 -0.2 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.2 N.D. +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 +0.2 N.D. +1.0
growth on ypd YPD +0.1 -0.2 +0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.2 +0.5 N.D. +0.0
auxotrophy Dropout Complete +0.0 +0.1 +0.3 N.D. +0.6
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.0 N.D. +1.0
growth on oleic acid YNB Glucose +0.1 +0.0 +0.2 N.D. +0.9
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 +0.3 N.D. +0.8
growth on ricinoleic acid YNB Glucose +0.2 +0.5 +0.4 N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 +0.4 N.D. +1.1
auxotrophy YNB Glucose +0.1 +0.2 +0.2 N.D. +1.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.3 +0.4 N.D. +1.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 +0.5 N.D. +1.5
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