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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13967 and 13968 are separated by 646 nucleotides
13968 and 13969 are separated by 267 nucleotides
13969 and 13970 are separated by 628 nucleotides
13970 and 13971 are separated by 339 nucleotides
mRNA_5599: 13967 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 475,591 to 478,385
13967
mRNA_5600: 13968 - BLAST polysaccharide lyase family 14 protein [Sistotremastr..., at 479,032 to 480,783
13968
mRNA_5601: 13969 - K15014 SLC29A1_2_3, ENT1_2_3 solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3, at 481,051 to 483,053
13969
mRNA_5602: 13970 - HMMPfam-AAA-ATPase Vps4-associated protein 1-PF08432, at 483,682 to 484,493
13970
mRNA_5603: 13971 - K09523 DNAJC3 DnaJ homolog subfamily C member 3, at 484,833 to 486,890
13971
Group
Condition
mRNA
_5599
mRNA
_5600
mRNA
_5601
mRNA
_5602
mRNA
_5603
13967
13968
13969
13970
13971
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.2
+0.3
N.D.
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.4
-0.1
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
-0.5
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
-0.1
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.0
+0.6
N.D.
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
+0.4
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.1
-0.3
N.D.
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.2
-0.2
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.1
-0.2
N.D.
+0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
+0.2
N.D.
+1.0
growth on ypd
YPD
+0.1
-0.2
+0.5
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.2
+0.5
N.D.
+0.0
auxotrophy
Dropout Complete
+0.0
+0.1
+0.3
N.D.
+0.6
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.0
N.D.
+1.0
growth on oleic acid
YNB Glucose
+0.1
+0.0
+0.2
N.D.
+0.9
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
+0.3
N.D.
+0.8
growth on ricinoleic acid
YNB Glucose
+0.2
+0.5
+0.4
N.D.
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
+0.4
N.D.
+1.1
auxotrophy
YNB Glucose
+0.1
+0.2
+0.2
N.D.
+1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
+0.4
N.D.
+1.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
+0.5
N.D.
+1.5
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