Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13968 and 13969 are separated by 267 nucleotides13969 and 13970 are separated by 628 nucleotides13970 and 13971 are separated by 339 nucleotides13971 and 13972 are separated by 366 nucleotides mRNA_5600: 13968 - BLAST polysaccharide lyase family 14 protein [Sistotremastr..., at 479,032 to 480,783 13968 mRNA_5601: 13969 - K15014 SLC29A1_2_3, ENT1_2_3 solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3, at 481,051 to 483,053 13969 mRNA_5602: 13970 - HMMPfam-AAA-ATPase Vps4-associated protein 1-PF08432, at 483,682 to 484,493 13970 mRNA_5603: 13971 - K09523 DNAJC3 DnaJ homolog subfamily C member 3, at 484,833 to 486,890 13971 mRNA_5604: 13972 - Hypothetical Protein, at 487,257 to 489,515 13972
Group Condition mRNA_5600 mRNA_5601 mRNA_5602 mRNA_5603 mRNA_5604
13968 13969 13970 13971 13972
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 N.D. -1.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 N.D. -0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.5 N.D. -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.1 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.6 N.D. -0.7 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 N.D. +0.7 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.4 N.D. -0.3 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 N.D. +0.4 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 N.D. +1.0 -0.1
auxotrophy Dropout Complete +0.1 +0.3 N.D. +0.6 -0.2
growth on ypd YPD -0.2 +0.5 N.D. +0.3 +0.2
growth on oleic acid YNB Glucose +0.0 +0.2 N.D. +0.9 -0.2
growth on ricinoleic acid YNB Glucose +0.5 +0.4 N.D. +0.4 -0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.0 N.D. +1.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.5 N.D. +0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 N.D. +0.8 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 N.D. +0.2 +0.9
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 N.D. +1.1 -0.2
auxotrophy YNB Glucose +0.2 +0.2 N.D. +1.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.4 N.D. +1.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.5 N.D. +1.5 -0.3
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