Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13972 and 13973 are separated by 411 nucleotides13973 and 13974 are separated by 159 nucleotides13974 and 13975 are separated by 503 nucleotides13975 and 13976 are separated by 1241 nucleotides mRNA_5604: 13972 - Hypothetical Protein, at 487,257 to 489,515 13972 mRNA_5605: 13973 - Hypothetical Protein, at 489,927 to 490,531 13973 mRNA_5606: 13974 - HMMPfam-Glycosyl hydrolase family 61-PF03443, at 490,691 to 492,139 13974 mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492,643 to 493,643 13975 mRNA_5608: 13976 - K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1, at 494,885 to 501,857 13976
Group Condition mRNA_5604 mRNA_5605 mRNA_5606 mRNA_5607 mRNA_5608
13972 13973 13974 13975 13976
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.3 -1.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.3 -1.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.1 +0.1 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.5 -2.1 +1.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. +0.9 -1.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.2 -1.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. +0.9 -1.6 -0.2
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.1 -0.4 +0.2
auxotrophy YNB Glucose -0.2 N.D. +0.1 -0.8 +0.3
auxotrophy Dropout Complete -0.2 N.D. +0.1 -0.5 +0.3
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.5 -0.1 +0.6
growth on oleic acid YNB Glucose -0.2 N.D. +0.3 -0.9 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.2 +0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. +0.1 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.2 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -0.3 -0.3 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.7 -0.9 +0.8
growth on ypd YPD +0.2 N.D. +0.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. +0.4 -0.3 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. +0.7 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 N.D. +0.4 +0.6 +0.1
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