Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13974 and 13975 are separated by 503 nucleotides13975 and 13976 are separated by 1241 nucleotides13976 and 13977 are separated by 369 nucleotides13977 and 13978 are separated by 88 nucleotides mRNA_5606: 13974 - HMMPfam-Glycosyl hydrolase family 61-PF03443, at 490,691 to 492,139 13974 mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492,643 to 493,643 13975 mRNA_5608: 13976 - K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1, at 494,885 to 501,857 13976 mRNA_5609: 13977 - HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058, at 502,227 to 504,581 13977 mRNA_5610: 13978 - KOG1611 Predicted short chain-type dehydrogenase, at 504,670 to 507,396 13978
Group Condition mRNA_5606 mRNA_5607 mRNA_5608 mRNA_5609 mRNA_5610
13974 13975 13976 13977 13978
ypd buoyancy 40 hrs High Buoyancy -0.3 -1.1 -0.2 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.8 +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 -1.3 +0.0 +0.0 +0.2
auxotrophy YNB Glucose +0.1 -0.8 +0.3 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 -1.2 +0.5 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -1.6 -0.2 +0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.9 -1.5 -0.1 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 -0.4 -0.0 -0.2
auxotrophy Dropout Complete +0.1 -0.5 +0.3 -0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -2.1 +1.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.3 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.4 +0.2 +0.1 +0.2
growth on oleic acid YNB Glucose +0.3 -0.9 +0.6 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 +0.7 +0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.5 -0.1 +0.6 +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 +0.3 +0.3 +0.2
growth on ypd YPD +0.2 -0.1 +0.4 +0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 -0.9 +0.8 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.6 +0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.3 +0.8 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 +0.3 +0.5 +0.0
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