Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13975 and 13976 are separated by 1241 nucleotides13976 and 13977 are separated by 369 nucleotides13977 and 13978 are separated by 88 nucleotides13978 and 13979 are separated by 266 nucleotides mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492,643 to 493,643 13975 mRNA_5608: 13976 - K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1, at 494,885 to 501,857 13976 mRNA_5609: 13977 - HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058, at 502,227 to 504,581 13977 mRNA_5610: 13978 - KOG1611 Predicted short chain-type dehydrogenase, at 504,670 to 507,396 13978 mRNA_5611: 13979 - HMMPfam-Protein of unknown function (DUF2433)-PF10360, at 507,663 to 510,497 13979
Group Condition mRNA_5607 mRNA_5608 mRNA_5609 mRNA_5610 mRNA_5611
13975 13976 13977 13978 13979
auxotrophy YNB Glucose 75mM Methionine -1.2 +0.5 -0.2 +0.1 -0.3
auxotrophy YNB Glucose -0.8 +0.3 -0.3 -0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine -1.3 +0.0 +0.0 +0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy -1.1 -0.2 -0.1 +0.0 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.6 -0.2 +0.3 +0.1 +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.8 +0.0 -0.2 +0.4
auxotrophy Dropout Complete -0.5 +0.3 -0.2 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.4 +0.2 +0.1 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.4 -0.0 -0.2 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 +0.8 +0.2 +0.2 -0.3
growth on oleic acid YNB Glucose -0.9 +0.6 +0.1 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.7 +0.0 +0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -2.1 +1.1 +0.4 +0.2 +0.7
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.1 +0.2 +0.1 +1.5
growth on oleic acid YNB Oleic Acid -0.1 +0.6 +0.2 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 +0.1 +0.2 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.3 +0.3 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.8 +0.4 +0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.1 -0.1 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 +0.5 +0.0 +0.3
growth on ypd YPD -0.1 +0.4 +0.3 -0.0 +1.5
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