Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13977 and 13978 are separated by 88 nucleotides13978 and 13979 are separated by 266 nucleotides13979 and 13980 are separated by 149 nucleotides13980 and 13981 are separated by 247 nucleotides mRNA_5609: 13977 - HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058, at 502,227 to 504,581 13977 mRNA_5610: 13978 - KOG1611 Predicted short chain-type dehydrogenase, at 504,670 to 507,396 13978 mRNA_5611: 13979 - HMMPfam-Protein of unknown function (DUF2433)-PF10360, at 507,663 to 510,497 13979 mRNA_5612: 13980 - K14213 PEPD Xaa-Pro dipeptidase, at 510,647 to 512,391 13980 mRNA_5613: 13981 - K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5, at 512,639 to 514,652 13981
Group Condition mRNA_5609 mRNA_5610 mRNA_5611 mRNA_5612 mRNA_5613
13977 13978 13979 13980 13981
auxotrophy YNB Glucose -0.3 -0.2 +0.0 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 -0.3 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.2 -0.4 +0.0 N.D.
auxotrophy Dropout Complete -0.2 +0.1 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.3 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.4 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.1 -0.5 +0.5 N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.3 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 +0.4 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.8 -0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.6 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.1 -0.0 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.0 +0.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.2 +0.3 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 +0.6 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 +0.3 +0.6 N.D.
growth on ypd YPD +0.3 -0.0 +1.5 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.2 +0.7 +0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 +1.5 +0.7 N.D.
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